SeqAn3  3.1.0
The Modern C++ library for sequence analysis.
translation_genetic_code.hpp
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1 // -----------------------------------------------------------------------------------------------------
2 // Copyright (c) 2006-2021, Knut Reinert & Freie Universität Berlin
3 // Copyright (c) 2016-2021, Knut Reinert & MPI für molekulare Genetik
4 // This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5 // shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6 // -----------------------------------------------------------------------------------------------------
7 
13 #pragma once
14 
15 #include <seqan3/core/platform.hpp>
16 
17 namespace seqan3
18 {
27 enum struct genetic_code : uint8_t
28 {
29  canonical = 1,
30 // vert_mitochondrial,
31 // yeast_mitochondrial,
32 // mold_mitochondrial,
33 // invert_mitochondrial,
34 // ciliate,
35 // flatworm_mitochondrial = 9,
36 // euplotid,
37 // prokaryote,
38 // alt_yeast,
39 // ascidian_mitochondrial,
40 // alt_flatworm_mitochondrial,
41 // blepharisma,
42 // chlorophycean_mitochondrial,
43 // trematode_mitochondrial = 21,
44 // scenedesmus_mitochondrial,
45 // thraustochytrium_mitochondrial,
46 // pterobranchia_mitochondrial,
47 // gracilibacteria
48 };
49 }
The main SeqAn3 namespace.
Definition: aligned_sequence_concept.hpp:29
genetic_code
Genetic codes used for translation of nucleotides into amino acids.
Definition: translation_genetic_code.hpp:28
@ canonical
The Standard Code.
Provides platform and dependency checks.